BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F02SP1|AL426552
(693 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 1349 0.0
>3x_Contig1592
Length = 12307
Score = 1349 bits (678), Expect = 0.0
Identities = 689/694 (99%), Gaps = 1/694 (0%)
Strand = Plus / Minus
Query: 1 aatcacattagaaactagagtgtgtctacataatctctttgattagcgamg-acgagttc 59
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 4803 aatcacattagaaactagagtgtgtctacataatctctttgattagcgaagcacgagttc 4744
Query: 60 tgttttttttccatccttctctgtgtgtttttgccaccctttgtcatcacatctctgctc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4743 tgttttttttccatccttctctgtgtgtttttgccaccctttgtcatcacatctctgctc 4684
Query: 120 atagaaagaaagcgagagagtaaactaatcgagttcgactaagtkttgttgaattkagta 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 4683 atagaaagaaagcgagagagtaaactaatcgagttcgactaagtgttgttgaattgagta 4624
Query: 180 catattctattctaccctatcatatcatattcgcacaaaaaagatgagtacatcaaccgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4623 catattctattctaccctatcatatcatattcgcacaaaaaagatgagtacatcaaccgc 4564
Query: 240 taaacgaccttttgacaacaagagggccggttcgcccgatgatggtacggatagcgattc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4563 taaacgaccttttgacaacaagagggccggttcgcccgatgatggtacggatagcgattc 4504
Query: 300 tgggggcaacaattccggatcgagtcccgcttccaaacgtagggaacgtaagccaggtag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4503 tgggggcaacaattccggatcgagtcccgcttccaaacgtagggaacgtaagccaggtag 4444
Query: 360 gaagcctttggaaaccgaggcgaaggacaagaggactgctcagaacagggctgctcaaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4443 gaagcctttggaaaccgaggcgaaggacaagaggactgctcagaacagggctgctcaaag 4384
Query: 420 agcgttccgtgaacgtagagagcgcaagatgaaggaattagaggataaagttagtcagtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4383 agcgttccgtgaacgtagagagcgcaagatgaaggaattagaggataaagttagtcagtt 4324
Query: 480 ggaatctctcaataaacaatcggaattggaaactaaattcttgaggaatcaggtcacgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4323 ggaatctctcaataaacaatcggaattggaaactaaattcttgaggaatcaggtcacgaa 4264
Query: 540 tctattatcagagctaaaacgttacaatccagaactccccaagaaaagagattctatcct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4263 tctattatcagagctaaaacgttacaatccagaactccccaagaaaagagattctatcct 4204
Query: 600 tttggattacctagccaaacaacgtaaagcgtccattgatagcmatccggatttttctgc 659
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4203 tttggattacctagccaaacaacgtaaagcgtccattgatagcaatccggatttttctgc 4144
Query: 660 cgcagccaataaagcagctaacagcaaggacagt 693
||||||||||||||||||||||||||||||||||
Sbjct: 4143 cgcagccaataaagcagctaacagcaaggacagt 4110
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4129
Number of Sequences: 1807
Number of extensions: 4129
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 693
length of database: 10,358,551
effective HSP length: 16
effective length of query: 677
effective length of database: 10,329,639
effective search space: 6993165603
effective search space used: 6993165603
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)